Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397878.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1183.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18858

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1115
171
6.5
171
81
4
1086
36
13
13
36
1.84
1--1115
343
3.3
339
80
5
1201
36
13
13
36
1.84
2209--5303
172
18.1
171
77
4
2729
37
12
14
35
1.84
7808--8157
171
2.0
172
81
0
405
35
16
11
34
1.84
12407--13165
172
4.4
171
78
7
707
37
13
13
35
1.83
13870--15521
172
9.6
170
81
4
1629
34
14
13
37
1.85
13871--15504
343
4.8
339
81
4
1706
34
14
13
37
1.85
18006--18845
171
4.9
169
71
7
439
34
14
12
36
1.84

Tables:   1

The End!