Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397893.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1199.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9695

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
407--2263
172
10.8
172
74
7
1312
34
13
13
38
1.84
428--2234
344
5.3
343
79
4
1678
34
13
13
38
1.84
419--2236
515
3.5
504
78
6
1733
34
13
13
38
1.84
4352--4782
171
2.5
169
79
3
407
34
14
12
38
1.84
5918--6674
172
4.4
173
81
3
830
35
13
12
39
1.82
5917--6677
346
2.2
344
81
4
915
34
13
12
39
1.82
6735--7878
172
6.6
171
76
7
911
35
13
12
38
1.83
6735--7878
346
3.3
343
78
5
1017
35
13
12
38
1.83

Tables:   1

The End!