Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397900.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1205.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5968

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1061--3146
171
12.0
171
77
7
1726
36
11
14
36
1.83
2459--2492
16
2.1
16
89
10
52
32
11
5
50
1.63
1061--2998
528
3.7
527
79
6
2029
36
11
13
36
1.82
1062--3136
870
2.4
862
79
6
2016
36
11
14
35
1.82
4810--5968
172
6.8
170
82
3
1232
37
13
14
35
1.85
4831--5965
341
3.3
338
83
4
1298
37
13
14
34
1.85

Tables:   1

The End!