Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397921.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1226.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12884

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
538--2408
172
11.0
172
75
4
1453
35
13
11
36
1.81
1043--2408
340
4.0
333
76
7
929
35
13
12
37
1.82
1248--2408
512
2.3
501
79
7
1162
35
13
12
36
1.82
1076--2402
683
2.0
673
82
4
1539
35
13
12
37
1.82
2541--2919
171
2.2
171
85
1
510
35
12
11
40
1.78
3021--4295
170
7.5
171
72
7
808
35
12
11
37
1.79
4454--5946
171
8.7
170
72
9
761
35
13
11
35
1.81
6234--6293
28
2.1
29
84
3
77
36
6
8
48
1.60
6898--7288
173
2.3
171
82
5
448
35
13
10
40
1.79
9207--10968
171
10.3
168
74
6
1003
33
12
11
37
1.80
9207--10964
341
5.1
337
76
5
1212
33
12
11
37
1.80

Tables:   1

The End!