Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397949.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1253.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8534

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
709--1022
172
1.8
170
83
2
414
38
12
13
35
1.83
2313--5700
171
19.9
170
74
5
2096
37
12
13
35
1.82
2448--5700
514
6.4
510
75
7
1711
37
12
13
35
1.82
5794--6933
171
6.8
169
73
10
780
39
12
13
35
1.82
5796--6678
344
2.6
335
82
4
1005
40
13
12
34
1.82
7702--8534
171
4.9
169
73
5
641
37
12
11
36
1.79

Tables:   1

The End!