Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397972.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1278.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4686

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
461--851
172
2.3
172
85
2
516
35
12
15
36
1.86
461--890
173
2.5
172
81
7
512
33
13
15
37
1.87
634--1193
303
1.9
295
85
4
700
34
13
14
35
1.86
1936--2632
171
4.1
170
79
6
647
37
13
12
36
1.83
2798--3947
341
3.4
338
81
5
1237
38
12
13
36
1.81
2798--4008
172
7.1
170
80
6
1139
37
12
13
36
1.82

Tables:   1

The End!