Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397990.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1296.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8685

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1175--2064
171
5.2
169
75
8
628
38
12
13
34
1.82
1175--1838
170
3.9
170
77
8
496
39
12
12
34
1.82
2505--2820
164
1.9
169
83
5
419
39
12
13
33
1.83
2505--2902
171
2.4
167
78
9
414
38
12
13
32
1.82
3266--4678
172
8.3
172
71
9
658
34
15
11
36
1.84
4843--7147
171
13.6
171
73
8
1113
36
14
11
38
1.81
5637--5943
150
2.0
150
95
0
551
37
13
10
38
1.79
5125--6461
662
2.0
661
80
6
1492
35
14
11
38
1.82
5787--7127
513
2.6
511
82
3
1545
35
14
11
38
1.82

Tables:   1

The End!