Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397998.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1304.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20688

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1663--1974
169
1.8
170
80
4
369
37
10
14
36
1.82
3696--4456
171
4.5
168
73
6
545
34
13
10
38
1.79
3720--4365
341
1.9
331
79
5
642
34
13
10
37
1.80
5322--7836
171
14.7
168
69
7
948
34
13
10
36
1.79
6231--7285
341
3.1
331
76
8
726
33
14
10
37
1.80
6462--7819
341
4.0
331
76
8
734
34
13
10
37
1.80
9397--9716
169
1.9
171
83
3
423
34
15
10
40
1.81
15099--15457
170
2.1
170
84
6
449
41
9
11
36
1.75
16886--18027
170
6.7
166
68
6
487
34
10
13
33
1.79
18279--19245
171
5.7
171
75
4
819
35
12
13
34
1.81
18279--19260
342
2.9
338
74
4
1033
35
12
12
34
1.81
18279--19571
662
1.9
670
83
4
1674
35
11
13
34
1.81

Tables:   1

The End!