Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398019.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1326.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14144

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84--128
21
2.1
21
91
0
72
31
24
15
28
1.96
431--1915
171
8.8
170
76
8
1135
35
12
12
39
1.82
431--1912
341
4.4
339
76
9
1284
35
12
12
39
1.82
1112--1406
151
2.0
150
81
6
355
36
11
12
39
1.79
4458--5029
171
3.4
170
76
3
556
31
11
12
41
1.78
5161--8155
171
17.6
170
79
5
2472
35
14
11
37
1.83
5165--8150
512
5.8
509
78
6
2542
35
14
11
37
1.82
9958--14144
171
24.5
171
77
6
2642
34
13
12
38
1.83
9958--14144
342
12.3
340
78
5
3406
34
13
12
38
1.83
9958--14133
513
8.1
510
77
5
3446
34
13
12
38
1.83

Tables:   1

The End!