Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398047.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1356.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10279

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1215--2629
171
8.3
171
75
4
1024
34
13
9
37
1.78
1215--2627
342
4.1
341
75
3
1190
34
14
9
37
1.79
2995--3718
170
4.3
170
80
2
749
35
13
10
38
1.79
3038--3702
339
2.0
326
84
3
748
35
14
10
37
1.80
5036--5364
170
2.0
161
84
7
419
33
12
11
38
1.80
5035--6184
171
6.8
170
72
6
533
34
13
11
36
1.80
6954--7275
170
1.9
162
84
3
346
34
14
9
38
1.78
7488--8353
170
5.1
169
77
4
767
38
8
13
35
1.77
8620--10279
171
9.7
170
72
5
861
34
13
10
35
1.79

Tables:   1

The End!