Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398069.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1378.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18304

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6243--6732
170
2.9
168
71
6
430
36
15
11
33
1.82
6862--7250
170
2.3
172
75
2
399
33
14
10
35
1.81
7353--7812
172
2.7
160
75
12
370
35
15
9
34
1.80
7353--8313
169
5.6
170
75
4
711
36
15
9
34
1.79
9243--9556
170
1.8
171
84
4
429
37
12
11
39
1.78
12751--13178
172
2.5
171
77
4
477
37
14
8
37
1.76
15061--15369
170
1.9
161
81
6
304
36
10
14
35
1.81
15525--15555
16
1.9
16
93
0
53
64
6
0
29
1.18
15006--15752
171
4.4
171
75
5
557
39
9
11
34
1.76

Tables:   1

The End!