Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398097.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1401.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29302

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11213--12703
172
8.7
170
78
6
1320
34
15
12
37
1.85
11536--11578
21
2.0
21
81
0
50
41
18
16
23
1.89
11313--12492
343
3.4
340
82
4
1182
35
15
12
36
1.86
11216--12594
511
2.7
506
83
6
1657
34
15
12
37
1.85
13300--14762
172
8.5
172
79
3
1468
36
14
12
36
1.84
13427--14762
516
2.6
516
86
2
1799
36
15
12
36
1.85
15989--16797
172
4.7
172
87
2
1126
37
14
12
34
1.85
15989--16754
345
2.2
344
91
1
1250
37
15
12
34
1.85
17057--17457
172
2.3
172
79
4
398
34
15
12
37
1.85
20613--21133
172
3.0
172
78
1
508
33
14
12
35
1.84
24428--24866
171
2.6
172
78
4
483
36
13
13
36
1.85
25225--25675
172
2.6
171
82
2
530
37
11
15
35
1.84

Tables:   1

The End!