Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398149.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1453.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11044

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--959
171
5.6
171
79
4
1004
37
11
14
36
1.82
4--959
342
2.8
341
85
2
1256
37
11
14
36
1.82
1636--2026
171
2.3
169
79
7
380
39
10
13
36
1.79
2813--3958
512
2.2
510
86
1
1542
40
12
12
34
1.81
2808--4053
171
7.3
170
80
3
1243
39
12
13
34
1.81
5119--5594
170
2.8
168
79
4
519
39
12
11
31
1.78
5836--8225
170
14.1
169
76
6
1776
40
12
13
33
1.81
5870--8130
339
6.7
336
76
9
1703
40
12
13
34
1.81
5870--8224
341
7.0
337
76
8
1816
40
12
13
33
1.81
8989--11044
171
12.1
170
72
6
1007
32
12
12
38
1.82
8992--11044
342
6.0
338
75
5
1442
32
12
12
38
1.82

Tables:   1

The End!