Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398150.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1453.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22532

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
435--2560
171
12.5
171
71
5
1107
33
13
11
37
1.80
435--1813
341
4.0
342
77
5
965
34
13
10
37
1.79
2668--3541
171
5.1
170
79
4
902
36
13
11
39
1.81
2668--3541
343
2.6
338
82
4
1020
36
13
11
39
1.81
4169--4554
171
2.3
170
84
2
515
34
15
12
37
1.84
4805--5929
171
6.6
169
79
6
1064
35
14
11
38
1.82
4805--5932
341
3.3
333
81
7
1247
35
14
11
38
1.82
6035--7595
171
9.1
170
79
5
1413
39
11
13
35
1.81
7696--8425
171
4.3
168
78
6
593
33
12
12
41
1.80
7702--8425
337
2.1
337
79
7
792
33
12
12
41
1.80
8627--10319
171
9.9
170
80
4
1661
34
13
11
39
1.82
8628--10319
341
5.0
338
79
6
1720
34
13
11
39
1.82
10480--11221
171
4.3
170
75
7
510
34
12
11
40
1.79
11331--12951
171
9.5
171
78
5
1402
35
12
11
40
1.80
13106--17008
171
23.0
170
79
5
3719
35
13
11
38
1.81
13106--17008
341
11.5
339
80
5
3707
35
13
11
38
1.81
18015--18326
169
1.9
159
86
6
360
36
11
11
37
1.77
18611--19471
171
5.0
169
75
6
673
34
12
11
39
1.78
20018--22523
170
14.7
169
77
7
1923
34
12
12
39
1.81
20018--22524
681
3.7
672
78
7
2394
34
12
12
39
1.81

Tables:   1

The End!