Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398151.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1454.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21131

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--819
171
4.8
171
73
4
444
34
13
13
36
1.85
1127--1852
171
4.2
172
82
5
805
32
13
15
38
1.86
2477--4828
341
6.9
336
78
7
2077
33
13
14
38
1.86
2236--4828
170
15.2
170
78
5
2167
32
13
14
37
1.85
5290--5785
170
2.9
166
82
6
525
33
13
13
39
1.84
6525--13100
170
38.5
171
78
5
5674
33
14
14
37
1.85
6525--13100
853
7.7
850
79
5
6128
33
14
14
37
1.85
11508--11556
20
2.5
20
100
0
98
42
24
18
14
1.87
11369--11726
190
1.9
185
84
5
477
34
16
13
35
1.88
13207--14238
170
6.1
170
78
4
877
32
14
15
37
1.87
13207--14223
340
3.0
336
80
7
1056
32
14
14
38
1.87
13207--14238
511
2.0
511
83
3
1299
32
14
15
37
1.87
18204--20528
171
13.7
166
76
8
1647
33
13
14
38
1.85
18204--20528
341
6.8
338
78
6
1992
33
13
14
38
1.85
19660--19702
22
2.0
22
85
0
59
39
2
6
51
1.42

Tables:   1

The End!