Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397343.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_542.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47910

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
449--494
21
2.2
20
82
14
58
69
2
26
2
1.11
3909--4684
171
4.6
168
76
9
520
34
14
12
38
1.83
3909--4773
342
2.5
340
78
5
799
34
15
12
37
1.85
36719--37085
171
2.2
171
79
3
382
39
10
11
35
1.76
38378--41455
171
18.0
171
79
5
2748
38
12
14
35
1.83
38378--41455
854
3.6
847
80
6
3167
38
12
14
35
1.83
43230--43629
170
2.4
166
79
7
425
39
11
12
37
1.79
45980--46369
171
2.3
171
77
8
400
41
8
13
36
1.75

Tables:   1

The End!