Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398185.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1489.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9003

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
481--939
171
2.7
169
82
2
506
36
14
11
37
1.84
1361--4060
171
15.8
170
80
4
2555
36
13
11
38
1.80
4361--6029
171
9.8
169
70
7
742
34
11
12
37
1.79
7103--7896
171
4.6
171
75
3
592
35
13
10
38
1.79
8002--8841
171
4.9
171
81
3
809
36
12
12
37
1.81
8098--8915
170
4.8
170
82
3
822
36
11
12
38
1.81
8098--8908
340
2.4
340
83
2
973
36
11
12
38
1.81

Tables:   1

The End!