Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398189.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1493.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5853

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
246--1133
171
5.2
169
78
3
749
37
12
12
35
1.80
5--1133
342
3.3
331
76
7
912
37
12
12
35
1.81
6--1122
513
2.2
503
78
6
1128
36
12
12
35
1.82
1764--4543
171
16.3
170
74
4
1822
36
12
12
34
1.82
4719--5208
169
2.9
161
74
13
358
38
13
12
31
1.82
4719--5849
171
6.6
170
75
5
812
38
12
12
32
1.81

Tables:   1

The End!