Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398191.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1495.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11873

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
428--757
171
2.0
161
77
14
314
38
9
12
36
1.75
1432--2775
171
8.0
168
74
11
1009
38
12
13
35
1.83
1814--2420
327
1.9
324
80
5
713
38
12
14
34
1.84
4201--6913
171
15.9
169
78
7
2084
38
12
14
35
1.83
3932--6913
854
3.5
852
84
5
3417
37
12
14
35
1.83
4210--6904
683
3.9
683
78
6
2498
38
12
14
35
1.83
7014--8399
171
8.1
169
78
6
1296
38
12
14
35
1.83
7014--8399
341
4.1
338
77
7
1121
38
12
14
35
1.83
7014--8399
345
4.1
339
77
7
1333
38
12
14
35
1.83
8672--10475
171
10.6
171
76
6
1449
38
12
13
35
1.83
9489--9789
159
1.9
159
84
2
399
37
12
15
34
1.85
10646--11871
171
7.2
170
78
5
1034
38
11
14
35
1.83
10646--11725
343
3.2
335
81
4
1159
37
11
14
35
1.83

Tables:   1

The End!