Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398198.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1500.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9453

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
419--1033
169
3.6
172
83
5
779
34
13
16
35
1.88
5178--5848
170
3.9
170
78
4
561
33
14
11
36
1.82
5361--6033
170
3.9
169
75
8
458
33
13
11
38
1.81
6421--6460
21
1.9
21
84
0
53
25
12
15
47
1.80
6316--8331
171
11.8
171
80
5
1948
38
12
14
34
1.83
6316--8331
341
5.9
341
79
6
2074
38
12
14
34
1.83

Tables:   1

The End!