Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397350.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_947.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43071

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2694--3239
170
3.1
171
79
7
610
31
13
15
37
1.86
3044--3455
216
1.9
215
84
4
544
32
15
14
37
1.88
3259--6186
171
17.2
170
78
5
2652
32
15
14
37
1.88
3259--6186
341
8.6
337
79
6
2468
32
15
14
37
1.88
3259--6186
512
5.7
513
77
6
2622
32
15
14
37
1.88
5462--6036
172
3.4
169
81
7
490
31
15
14
38
1.87
6541--7146
172
3.5
171
80
5
697
33
14
12
38
1.84
7202--9957
170
16.2
171
75
5
2040
32
14
13
37
1.85
7224--9957
341
8.0
341
74
6
1799
32
13
13
37
1.85
19700--20052
171
2.1
171
83
3
442
36
14
13
34
1.86
23060--24297
171
7.2
171
75
2
969
36
14
14
32
1.86
40884--41320
170
2.5
169
81
7
499
35
14
13
36
1.86

Tables:   1

The End!