Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398224.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_153.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11635

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
603--1078
170
2.8
170
76
6
390
36
13
13
34
1.84
603--2616
171
11.8
170
71
8
750
39
12
12
33
1.82
1361--1661
161
1.9
161
84
5
403
39
10
12
36
1.79
1589--1980
172
2.3
172
79
3
423
42
13
12
31
1.81
1760--2506
343
2.2
342
79
5
758
43
11
11
33
1.77
1570--2504
515
1.8
515
79
4
1096
42
11
11
34
1.78
2744--3072
171
1.9
171
83
6
425
40
12
12
34
1.81
3996--4461
170
2.7
171
80
6
510
39
11
13
35
1.80
4615--5226
171
3.6
170
78
6
505
39
12
10
36
1.78
5095--6254
511
2.3
510
78
5
1200
40
12
12
35
1.81
5467--6252
341
2.3
340
82
5
919
41
12
12
34
1.79
4587--6252
170
9.8
171
75
5
869
39
12
12
35
1.81
7364--9458
171
12.3
168
78
6
1679
35
13
12
38
1.82
7386--9458
342
6.1
342
78
5
1909
35
13
12
38
1.82
10495--11600
171
6.5
171
77
4
965
35
14
12
37
1.84
10932--11632
170
4.2
163
76
7
462
35
13
11
38
1.82

Tables:   1

The End!