Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398248.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1550.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13017

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1867--1909
21
2.0
21
81
0
50
44
20
11
23
1.84
2239--2895
171
3.8
171
76
6
440
35
13
10
40
1.79
2271--2895
342
1.8
342
80
4
760
35
13
10
41
1.78
3434--3910
171
2.8
169
80
2
488
34
16
10
35
1.84
4121--4163
21
2.0
21
82
8
52
41
25
11
20
1.86
4714--13017
171
48.5
171
78
4
6632
34
13
12
37
1.83

Tables:   1

The End!