Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001097.1 Hibiscus syriacus cultivar Beakdansim tig00002172_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62932

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--38
14
2.6
14
95
0
65
24
32
21
21
1.98
2526--2559
13
2.6
13
100
0
68
52
0
0
47
1.00
3146--3982
232
3.6
229
77
12
720
29
11
9
48
1.72
6741--6815
30
2.5
30
86
4
107
34
22
17
25
1.96
7946--8464
241
2.2
242
83
5
660
30
13
9
46
1.75
8482--9753
492
2.6
488
83
4
1572
29
13
9
47
1.75
8482--9753
244
5.2
244
83
3
1512
29
13
9
47
1.75
9630--9865
116
2.0
115
86
1
337
28
13
10
47
1.75
9387--10113
360
2.0
360
90
0
1130
30
13
9
46
1.75
9745--11658
244
7.9
244
83
4
2290
29
13
9
47
1.74
9745--11663
489
4.0
484
83
5
2305
29
13
9
47
1.74
14730--14777
18
2.7
18
86
0
69
45
10
6
37
1.64
18409--18454
18
2.6
18
89
0
65
47
10
6
34
1.64
18488--18534
17
2.8
17
83
0
58
42
12
14
29
1.83
31654--31681
14
2.0
14
100
0
56
21
42
0
35
1.53
43814--43908
49
1.9
50
85
6
131
17
21
25
35
1.95
44445--44489
19
2.4
19
81
7
56
53
2
8
35
1.45
46998--47050
23
2.3
23
96
0
97
32
16
18
32
1.94
56715--56753
21
1.9
20
84
5
51
64
7
2
25
1.33
61020--61434
215
1.9
215
93
0
706
32
17
17
33
1.93
62876--62906
15
2.1
14
94
5
53
38
12
0
48
1.42

Tables:   1

The End!