Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001128.1 Hibiscus syriacus cultivar Beakdansim tig00002231_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  251207

Tables:   1   2   

This is table  2  of  2  ( 131 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212607--212653
24
1.9
25
86
4
69
29
21
10
38
1.87
217420--217492
35
2.0
37
84
10
98
49
4
1
45
1.29
219087--219187
52
1.9
52
85
0
139
24
21
13
39
1.90
223197--223241
2
22.5
2
100
0
90
51
0
0
48
1.00
223617--223672
2
28.0
2
100
0
112
50
0
0
50
1.00
229182--229220
19
2.0
20
90
10
62
43
0
5
51
1.24
229212--229252
19
2.1
20
86
4
57
31
2
4
60
1.30
235278--235318
21
1.9
22
85
5
57
34
29
12
24
1.91
245273--245328
14
3.9
14
75
13
51
44
32
0
23
1.53
245277--245320
22
2.1
20
91
8
70
45
34
0
20
1.51
245343--245411
14
4.9
15
76
13
67
26
0
27
46
1.53

Tables:   1   2

The End!