Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001134.1 Hibiscus syriacus cultivar Beakdansim tig00002261_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  206115

Tables:   1   2   

This is table  2  of  2  ( 150 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
170138--170179
18
2.4
17
81
14
50
26
0
0
73
0.83
170155--170199
22
2.0
22
87
8
65
24
2
0
73
0.95
171495--171531
19
1.9
19
89
10
58
8
24
0
67
1.17
174885--174945
8
7.6
8
79
3
52
80
6
13
0
0.90
174885--174944
24
2.5
22
84
12
75
80
6
13
0
0.91
174885--174954
24
2.9
23
83
10
70
77
7
14
1
1.05
175560--175614
22
2.5
22
96
0
101
36
25
12
25
1.91
176559--177827
106
12.0
106
92
0
2020
34
25
18
22
1.96
178531--178627
37
2.6
37
85
0
140
40
16
11
31
1.84
179155--179205
21
2.4
21
80
3
57
23
9
1
64
1.34
179352--179396
8
5.5
8
91
2
72
24
0
0
75
0.80
181588--181631
21
2.1
21
91
0
70
29
0
13
56
1.38
181607--181705
47
2.2
47
87
7
152
39
0
12
48
1.40
181655--181742
35
2.5
35
84
3
122
39
0
13
46
1.43
183676--183745
28
2.4
28
81
9
79
40
14
10
35
1.79
184728--184767
21
1.9
21
89
0
62
12
27
35
25
1.92
186224--186271
19
2.5
20
82
3
62
29
12
6
52
1.63
189194--189257
32
2.0
32
100
0
128
50
12
6
31
1.65
189450--189544
21
4.6
21
77
5
104
20
21
27
31
1.97
189552--189738
73
2.6
73
78
9
220
42
13
11
32
1.80
189980--190647
217
3.1
215
83
4
779
26
14
18
40
1.90
189963--190607
271
2.4
270
86
3
839
26
14
18
40
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
189963--190647
54
12.6
54
81
2
708
25
14
18
40
1.89
190556--190738
91
2.0
92
90
3
289
22
17
16
43
1.87
191188--191511
108
3.0
106
84
6
382
36
12
11
39
1.79
193595--193631
18
2.1
18
85
14
51
43
10
13
32
1.79
201360--201717
43
8.3
42
76
10
271
24
21
20
34
1.96
201346--201669
85
3.8
85
82
5
341
23
21
20
34
1.97
201347--201700
128
2.8
124
79
6
332
23
20
20
35
1.96
204361--204462
2
51.0
2
96
3
188
50
0
0
49
1.07

Tables:   1   2

The End!