Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001135.1 Hibiscus syriacus cultivar Beakdansim tig00002263_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  162108

Tables:   1   2   

This is table  2  of  2  ( 136 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
146933--146981
23
2.2
22
85
10
64
36
0
0
63
0.95
147317--147361
20
2.2
21
92
4
74
40
22
17
20
1.92
147390--147481
39
2.3
40
81
5
107
34
23
11
29
1.91
147390--147481
19
4.7
20
81
5
107
34
23
11
29
1.91
147637--147674
15
2.4
16
86
4
51
28
5
2
63
1.30
148419--148472
24
2.2
24
96
0
99
27
20
16
35
1.94
150717--150752
18
2.0
18
88
0
54
55
22
2
19
1.56
150964--151064
43
2.4
43
86
1
132
27
15
23
32
1.95
152687--152809
42
2.9
41
86
4
174
21
21
34
21
1.96
152687--152805
21
5.7
21
82
5
134
21
21
34
22
1.97
154885--154944
20
3.1
19
76
7
66
43
20
16
20
1.88
155475--155590
20
5.8
20
84
0
142
19
12
21
46
1.82
155475--155590
40
2.9
40
82
0
160
19
12
21
46
1.82
155631--155673
19
2.2
20
79
8
52
25
16
30
27
1.97
155818--155855
9
4.1
9
86
6
58
18
0
2
78
0.86
155809--155853
19
2.3
19
88
7
63
22
0
2
75
0.91

Tables:   1   2

The End!