Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000128.1 Hibiscus syriacus cultivar Beakdansim tig00000232_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62375

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
632--670
19
2.2
18
86
9
53
10
5
5
79
1.04
4349--5733
105
13.2
106
93
1
2198
32
25
18
23
1.97
7707--7754
20
2.4
19
79
6
51
14
4
4
77
1.08
11063--11102
2
20.0
2
100
0
80
50
0
0
50
1.00
12485--12536
3
17.7
3
88
11
81
67
0
0
32
0.91
12895--13311
113
3.7
113
91
1
658
27
19
13
39
1.89
14469--14517
16
2.8
17
81
12
64
48
6
8
36
1.58
18398--18428
9
3.6
9
91
8
55
54
0
22
22
1.44
27710--27780
3
23.7
3
80
11
83
60
0
0
39
0.97
27697--27780
12
7.7
11
78
15
86
58
0
0
41
0.98
29553--29626
29
2.5
31
84
4
89
31
13
9
45
1.75
29749--29818
29
2.3
29
82
4
86
47
4
17
31
1.67
30368--30393
11
2.4
11
100
0
52
80
0
0
19
0.71
33228--33286
28
2.0
29
84
12
77
33
3
5
57
1.37
33648--33723
34
2.3
34
88
2
109
32
17
14
35
1.90
33995--34385
185
2.1
186
90
0
615
42
3
8
45
1.52
35775--35805
13
2.4
13
100
0
62
48
0
0
51
1.00
35801--36029
128
1.8
127
88
5
356
45
9
11
33
1.73
38048--38093
2
23.5
2
95
4
85
47
0
0
52
1.00
38778--38832
3
17.7
3
81
7
65
65
1
0
32
1.03
42119--42185
32
2.1
31
81
10
73
56
5
10
26
1.56
51439--51522
42
2.0
43
86
6
118
20
1
16
61
1.40
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51836--52053
84
2.6
84
81
6
235
32
19
17
30
1.95
52079--52103
2
12.5
2
100
0
50
48
0
0
52
1.00
55525--55600
3
26.3
3
76
12
70
56
0
2
40
1.13
55525--55593
8
8.0
8
74
19
59
56
0
2
40
1.14
55552--55607
14
4.0
14
76
21
55
55
0
0
44
0.99
55525--55612
11
8.2
11
78
8
76
55
0
2
42
1.12
55792--56306
55
9.9
55
80
10
458
30
24
14
30
1.94
56202--56298
45
2.2
45
96
0
176
28
24
15
30
1.96
56147--56328
100
1.8
100
91
2
303
26
26
14
32
1.94
56260--56971
56
12.8
56
91
1
1114
25
24
16
33
1.96
56973--57052
37
2.2
37
86
8
110
20
17
17
45
1.86
57366--57498
37
3.6
37
80
9
141
27
17
18
36
1.93
58791--59140
125
2.8
123
85
5
447
24
26
15
33
1.95

Tables:   1

The End!