Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001282.1 Hibiscus syriacus cultivar Beakdansim tig00002516_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  180784

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154371--154457
39
2.2
39
95
0
156
45
8
10
35
1.68
154683--154793
51
2.2
50
85
1
150
25
8
12
54
1.65
154826--154869
2
22.5
2
95
4
81
50
0
0
50
1.00
159440--160243
139
5.8
139
86
2
987
25
16
28
28
1.97
160142--160289
43
3.5
43
75
10
171
19
15
33
31
1.93
160183--160321
40
3.4
40
73
9
145
20
15
33
31
1.93
160146--160326
83
2.2
83
96
0
335
19
14
33
32
1.92
162272--162334
29
2.2
28
81
13
76
58
0
7
33
1.27
163147--163189
19
2.3
19
95
0
77
32
25
23
18
1.97
163541--163598
3
19.7
3
89
10
93
65
0
0
34
0.93
170552--170834
37
8.1
36
72
13
173
40
15
16
28
1.88
170552--170834
36
8.1
36
74
13
200
40
15
16
28
1.88
170609--170797
66
2.9
66
86
0
270
39
14
16
29
1.89
171606--171684
33
2.4
32
91
4
131
44
16
7
31
1.76
179655--179729
25
3.0
25
96
0
141
33
16
18
32
1.93

Tables:   1   2

The End!