Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001359.1 Hibiscus syriacus cultivar Beakdansim tig00002649_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  183523

Tables:   1   2   

This is table  2  of  2  ( 134 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162423--162461
13
3.0
13
84
0
51
12
0
10
76
1.01
162406--162470
26
2.4
26
80
12
69
12
3
9
75
1.15
162672--162701
13
2.3
13
94
0
51
30
0
0
70
0.88
163562--163614
24
2.2
24
86
6
72
54
13
20
11
1.69
163607--163785
86
2.1
86
90
3
288
59
9
7
24
1.54
166842--166904
20
3.2
19
91
6
83
9
44
0
46
1.36
166855--166904
20
2.5
20
100
0
100
8
46
0
46
1.32
168988--169029
22
1.9
22
95
0
75
26
21
26
26
1.99
171341--171377
18
2.1
18
90
10
58
0
29
24
45
1.53
172935--173014
23
3.5
23
96
1
144
21
23
33
21
1.97
179242--179290
20
2.5
20
89
0
71
28
12
30
28
1.93
180580--180619
21
1.9
21
94
0
71
27
22
25
25
2.00
183323--183379
21
2.7
21
94
0
96
28
21
22
28
1.99
183393--183446
20
2.7
20
91
0
72
27
14
31
25
1.95

Tables:   1   2

The End!