Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001362.1 Hibiscus syriacus cultivar Beakdansim tig00002655_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  681426

Tables:   1   2   3   

This is table  3  of  3  ( 253 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
639090--639309
55
4.0
55
90
2
329
28
26
15
29
1.96
640298--640345
8
5.9
8
79
13
53
12
10
0
77
1.00
640300--640369
31
2.2
32
84
5
88
11
14
0
74
1.08
655413--655452
19
2.1
19
86
9
55
50
10
2
37
1.50
655995--656571
99
5.8
99
91
0
904
33
22
16
27
1.96
661412--661450
19
2.1
19
100
0
78
64
10
15
10
1.50
665426--666131
362
2.0
360
95
1
1270
32
14
11
42
1.81
667467--667519
22
2.4
22
80
3
61
43
1
0
54
1.11
668808--669543
159
4.6
160
83
4
773
29
17
25
27
1.98
668800--669543
79
9.4
79
82
5
708
29
17
25
27
1.97
668808--669543
239
3.1
239
81
5
746
29
17
25
27
1.98
669499--669698
54
4.0
50
77
10
176
32
20
16
31
1.94
675446--675500
26
2.1
26
93
0
92
34
7
16
41
1.76

Tables:   1   2   3

The End!