Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001372.1 Hibiscus syriacus cultivar Beakdansim tig00002684_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  540953

Tables:   1   2   3   

This is table  3  of  3  ( 247 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
537131--537183
20
2.6
19
79
11
52
30
11
24
33
1.90
537234--537311
41
1.9
41
84
5
104
24
25
20
29
1.99
539286--539351
10
6.8
10
75
13
66
18
22
30
28
1.97
539287--539355
9
7.3
9
76
9
66
17
24
30
27
1.97
539286--539355
19
3.7
19
90
3
97
18
24
30
27
1.98
539349--539403
15
3.5
15
90
5
74
18
34
27
20
1.95
539381--539455
7
10.9
7
88
8
118
16
28
29
26
1.96

Tables:   1   2   3

The End!