Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001455.1 Hibiscus syriacus cultivar Beakdansim tig00002810_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63574

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5786--5852
29
2.3
29
84
5
82
20
11
4
62
1.46
5801--5872
29
2.5
29
80
8
74
19
13
5
61
1.52
10376--10449
32
2.3
33
86
11
109
50
8
24
17
1.73
21390--21439
21
2.4
22
80
10
59
64
14
8
14
1.50
25884--25930
21
2.2
21
96
0
85
23
34
14
27
1.94
26594--26643
3
16.3
3
95
4
91
34
0
0
66
0.92
27040--27098
20
3.1
19
82
9
66
76
3
20
0
0.93
27060--27101
15
2.8
15
85
10
59
80
2
16
0
0.81
27815--27916
44
2.3
43
77
11
100
26
4
4
63
1.35
28687--28724
13
2.7
15
92
8
62
23
5
2
68
1.23
39598--39660
16
3.8
17
82
4
67
31
7
7
52
1.59
40366--40766
82
4.9
82
97
0
748
28
13
20
37
1.91
41502--42488
112
8.8
112
95
2
1675
36
12
20
30
1.89
42740--42784
3
15.3
3
93
4
74
35
0
0
64
0.94
43221--43262
15
2.8
15
85
10
59
80
2
16
0
0.81
45134--45170
20
1.9
19
89
10
58
45
10
24
18
1.81
45959--45996
20
1.9
20
84
10
51
42
7
2
47
1.46
46876--46915
15
2.8
14
92
7
71
35
2
0
62
1.09
47487--47563
37
2.1
36
83
9
93
46
1
3
48
1.28
56265--56347
29
2.8
29
92
1
139
43
9
14
32
1.78
61009--61089
28
2.8
28
81
9
101
40
9
16
33
1.81

Tables:   1

The End!