Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001476.1 Hibiscus syriacus cultivar Beakdansim tig00002866_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  310879

Tables:   1   2   

This is table  2  of  2  ( 143 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247226--247298
30
2.5
30
93
2
121
30
20
6
42
1.78
247226--247298
15
4.9
15
76
3
85
30
20
6
42
1.78
255964--256023
29
2.1
29
87
3
86
8
15
6
70
1.33
262929--262974
20
2.3
20
100
0
92
47
8
26
17
1.76
265250--265640
43
9.2
43
76
6
325
32
18
22
25
1.97
265250--265635
85
4.5
86
77
6
360
33
17
22
26
1.96
266940--266971
3
10.7
3
100
0
64
34
0
0
65
0.93
274929--274968
17
2.4
17
91
0
62
27
22
25
25
2.00
275581--275644
21
3.3
21
62
20
57
43
15
12
28
1.83
275573--275644
37
1.9
37
94
0
126
41
15
12
30
1.84
276087--276146
16
3.9
16
83
14
72
33
1
0
65
1.03
276113--276172
9
6.6
9
75
21
54
23
3
0
73
0.98
276192--276260
35
1.9
36
88
8
106
36
5
1
56
1.32
276200--276260
17
3.4
17
84
15
79
34
6
1
57
1.34
280836--280882
2
24.5
2
91
8
80
53
0
0
46
1.00
280838--280882
13
3.5
13
96
3
83
53
0
0
46
1.00
291831--291884
25
2.2
24
84
12
67
38
12
20
27
1.89
296604--296897
148
2.0
148
93
0
507
23
23
19
32
1.98
297458--297483
6
4.3
6
100
0
52
19
15
15
50
1.79
301370--301401
14
2.3
14
100
0
64
37
9
0
53
1.34
301406--301708
154
2.0
153
88
1
455
36
32
11
19
1.88
301766--301824
24
2.5
24
91
5
93
55
16
10
16
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
301766--301832
24
2.8
23
86
8
89
53
17
8
19
1.70

Tables:   1   2

The End!