Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001480.1 Hibiscus syriacus cultivar Beakdansim tig00002873_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  157423

Tables:   1   2   

This is table  2  of  2  ( 159 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129013--129199
91
2.0
90
91
6
304
47
19
12
21
1.82
129343--129484
63
2.3
63
86
2
151
26
37
17
19
1.93
129366--129496
63
2.1
63
98
0
253
22
37
19
20
1.94
130972--131036
33
2.0
33
93
0
112
41
23
24
10
1.86
130955--131091
52
2.6
52
91
1
211
44
21
22
11
1.84
130947--131082
19
7.6
19
75
17
139
45
19
22
11
1.83
131087--131131
19
2.4
19
84
0
63
6
15
26
51
1.68
131685--131817
20
6.7
20
84
6
153
24
18
24
31
1.98
131685--131838
81
1.9
80
82
4
193
23
20
24
32
1.98
135383--135449
26
2.5
26
80
7
62
52
2
4
40
1.37
135418--135476
22
2.8
20
80
14
66
44
1
8
45
1.44
135430--135540
22
4.7
22
73
18
89
45
2
7
45
1.45
135457--135512
28
2.0
27
83
13
69
50
3
5
41
1.43
135488--135608
58
2.2
56
92
5
201
43
4
7
43
1.54
135551--135597
22
2.2
21
84
3
58
44
4
8
42
1.54
135622--135660
19
2.0
21
90
10
64
48
0
5
46
1.24
135622--135662
21
2.0
21
85
9
57
48
0
4
46
1.23
136583--136629
21
2.2
21
77
7
51
29
0
34
36
1.58
138002--138031
12
2.6
11
94
5
51
23
0
3
73
0.98
140718--140775
24
2.4
24
80
5
64
36
25
13
24
1.92
142479--142540
22
2.7
23
78
9
65
43
1
9
45
1.46
143989--144800
215
3.8
212
92
2
1208
49
8
12
29
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144824--144909
20
4.3
20
79
15
90
46
2
4
46
1.36
144829--144909
41
1.9
43
92
5
139
45
2
4
46
1.37
144824--144890
2
32.5
2
76
11
64
47
1
4
46
1.31
144955--145013
31
1.9
31
89
0
91
45
6
6
40
1.57
144966--145033
22
3.2
22
75
8
77
48
5
5
39
1.52
145055--145103
15
3.2
16
75
18
59
51
2
2
44
1.24
145059--145138
31
2.7
29
81
14
83
46
3
1
48
1.28
145124--145230
6
18.3
6
72
22
54
47
1
0
49
1.18
145122--145230
34
3.3
32
79
14
116
46
1
0
50
1.18
145122--145204
21
4.0
20
74
23
66
46
2
1
49
1.22
145122--145232
28
3.6
31
82
12
122
46
1
0
50
1.18
145178--145255
28
3.0
27
85
9
108
48
0
0
51
1.00
147872--147909
20
1.9
20
94
0
67
10
10
15
63
1.52
147871--147929
20
3.0
20
82
0
64
13
13
13
59
1.62
148685--148735
20
2.8
17
78
18
57
62
1
0
35
1.06
148803--148842
17
2.4
17
100
0
80
42
7
0
50
1.30
155870--155969
52
1.9
52
93
0
173
44
11
24
21
1.84

Tables:   1   2

The End!