Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001579.1 Hibiscus syriacus cultivar Beakdansim tig00003144_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  248634

Tables:   1   2   

This is table  2  of  2  ( 129 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225501--226507
165
6.1
163
85
5
1120
24
21
25
29
1.99
225476--226452
249
4.0
245
89
3
1259
23
21
25
29
1.99
225501--226507
414
2.4
414
93
0
1696
24
21
25
29
1.99
227599--227827
96
2.6
86
78
17
268
31
21
20
27
1.98
227647--227846
96
2.1
95
89
3
312
31
19
18
31
1.95
232674--232719
18
2.5
18
85
3
56
78
2
2
17
0.96
232687--232722
6
5.8
6
93
6
63
80
0
0
19
0.71
232684--232722
13
3.1
13
92
7
71
79
0
0
20
0.73
232721--232807
38
2.2
38
80
13
97
44
5
4
44
1.48

Tables:   1   2

The End!