Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001602.1 Hibiscus syriacus cultivar Beakdansim tig00003186_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63030

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3417--3485
19
3.4
19
77
14
84
42
8
11
37
1.72
3415--3503
42
2.1
41
93
4
160
41
6
12
39
1.69
4287--4352
30
2.2
30
86
0
87
33
16
25
24
1.96
20988--21048
23
2.7
23
86
0
95
18
22
27
31
1.97
26374--26434
23
2.7
23
89
0
95
18
24
27
29
1.98
26472--26505
17
2.1
17
88
5
52
32
23
5
38
1.79
27935--27995
22
2.7
23
82
5
70
37
14
18
29
1.90
43344--43397
22
2.4
23
87
6
85
14
22
12
50
1.77
44043--44068
13
2.0
13
100
0
52
38
7
0
53
1.30
50497--50537
21
2.0
21
90
0
64
48
2
4
43
1.37
51447--51509
30
2.0
32
84
9
85
50
6
1
41
1.37
52541--52586
19
2.3
20
86
13
69
54
10
17
17
1.70
55009--55074
33
2.0
33
87
0
96
28
1
45
24
1.62
56849--56883
18
1.9
18
94
0
61
34
2
11
51
1.53
56968--58166
197
6.1
197
94
3
2069
37
14
15
32
1.88
59578--59645
21
3.4
18
69
21
55
36
8
35
19
1.83
59578--59675
6
16.3
6
80
0
70
36
7
34
21
1.81
59593--59679
3
29.0
3
77
0
84
35
5
34
24
1.79
59581--59671
42
2.2
42
91
0
146
35
7
35
21
1.83
59578--59675
18
5.4
18
78
0
88
36
7
34
21
1.81
61035--61866
182
4.7
184
94
4
1433
35
15
15
34
1.89

Tables:   1

The End!