Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001674.1 Hibiscus syriacus cultivar Beakdansim tig00003348_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  384960

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
271745--272043
90
3.3
90
76
5
248
39
17
15
27
1.90
272059--272117
31
1.9
31
96
0
109
35
5
27
32
1.79
273529--273570
9
4.8
9
85
2
59
0
21
2
76
0.90
273549--273622
13
5.7
12
75
12
58
6
12
2
78
1.05
273549--273612
26
2.4
25
80
10
74
7
12
0
79
0.92
279307--279708
45
8.9
45
75
3
290
37
18
17
26
1.94
283885--283922
16
2.4
17
82
8
53
57
5
5
31
1.43
284923--285170
137
1.8
136
87
0
370
35
8
17
37
1.81
286801--286846
20
2.3
19
85
14
58
50
8
15
26
1.73
290905--290951
21
2.3
20
82
10
51
40
0
17
42
1.49
291719--291766
23
2.1
23
100
0
96
31
12
25
31
1.92
298607--298698
23
4.0
23
85
1
114
26
21
21
30
1.99
302487--302688
40
5.1
40
96
0
377
23
16
26
33
1.96
302793--303050
91
2.9
90
94
1
446
37
8
22
31
1.85
302793--303050
45
5.7
45
91
2
419
37
8
22
31
1.85
305685--305760
20
3.8
20
92
0
125
40
11
15
31
1.84
307214--373606
119
571.0
119
94
4
115683
28
12
19
39
1.88
373729--373758
14
2.1
14
93
0
51
13
36
0
50
1.42

Tables:   1   2

The End!