Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001785.1 Hibiscus syriacus cultivar Beakdansim tig00003604_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  274370

Tables:   1   2   

This is table  2  of  2  ( 154 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
247168--247221
19
3.0
19
70
30
55
40
1
3
53
1.29
247317--247367
23
2.2
23
86
6
68
49
3
0
47
1.20
247308--247353
23
2.0
23
91
0
74
52
4
2
41
1.33
247342--247425
34
2.5
34
74
20
86
48
3
1
46
1.27
247340--247429
33
2.7
34
71
10
78
50
3
1
45
1.25
248579--248610
11
2.9
11
95
0
55
59
3
0
37
1.13
249971--250072
3
33.3
3
88
3
105
57
0
0
42
0.98
251492--251521
14
2.1
14
93
0
51
50
0
0
50
1.00
255752--255812
17
3.6
16
83
14
61
75
0
1
22
0.89
255807--256189
35
10.8
36
73
17
150
45
7
3
43
1.49
255868--255931
29
2.2
29
91
0
101
43
6
4
45
1.50
255820--256107
102
2.9
97
77
13
296
45
7
3
43
1.49
255969--256070
31
3.2
29
78
14
96
45
6
3
44
1.49
255897--256191
36
8.2
37
78
10
269
44
7
3
44
1.50
256176--256208
2
17.0
2
93
6
59
51
0
0
48
1.00
255820--256193
36
10.6
37
74
14
239
45
7
3
43
1.49
256775--257504
84
8.8
84
78
5
707
25
19
25
29
1.98
256783--257504
248
2.9
246
86
3
971
24
19
25
29
1.99
262831--262861
16
2.0
15
93
6
53
83
3
0
12
0.75
264205--264255
12
4.2
12
83
11
68
76
0
5
17
0.98
264229--264288
6
10.8
5
83
13
57
75
0
3
21
0.95
264283--264588
36
8.8
36
72
18
127
46
7
2
43
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
264344--264407
29
2.2
29
91
0
101
43
6
4
45
1.50
264320--264445
65
2.0
64
84
4
164
45
7
3
42
1.52
264371--264590
36
6.3
35
76
14
204
45
7
3
43
1.48
264283--264583
101
3.0
98
78
11
302
45
7
2
43
1.48
264445--264510
31
2.2
29
83
5
87
43
6
3
46
1.43
265510--265570
29
2.0
31
84
9
81
24
0
32
42
1.55
266580--266605
12
2.2
12
100
0
52
30
7
0
61
1.24
268393--268452
4
14.0
4
81
10
66
50
0
3
46
1.18
268381--268474
32
2.8
34
85
12
131
45
0
6
47
1.28
268441--268485
20
2.3
21
77
14
51
42
2
6
48
1.41
271190--271241
28
1.9
26
84
7
68
32
3
0
63
1.12
272576--272611
17
2.2
17
90
5
56
36
13
13
36
1.85

Tables:   1   2

The End!