Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001818.1 Hibiscus syriacus cultivar Beakdansim tig00003678_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69170

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2081--2333
80
3.1
82
77
10
284
29
24
20
26
1.99
12077--12138
6
10.0
6
86
13
90
82
1
0
16
0.75
15234--15267
17
1.9
17
88
5
50
64
0
5
29
1.17
17285--17346
26
2.4
25
81
8
61
61
3
1
33
1.22
18488--18560
32
2.4
31
84
9
96
12
12
24
50
1.74
18456--18543
17
5.5
16
75
14
83
6
11
28
53
1.62
23629--23701
3
24.0
3
80
2
74
41
0
1
57
1.07
23627--23710
15
5.6
15
77
4
62
44
0
1
54
1.07
32715--33411
92
7.6
92
97
0
1288
26
14
23
35
1.94
36765--39803
76
41.0
76
91
5
4908
22
22
20
34
1.97
39959--40022
3
21.0
3
83
3
74
39
0
1
59
1.07
39959--40031
18
4.2
16
80
11
67
41
0
1
57
1.07
41456--41531
35
2.2
35
79
9
84
35
3
1
59
1.24
47224--47248
2
12.5
2
100
0
50
52
0
0
48
1.00
53086--53133
20
2.4
20
100
0
96
50
4
0
45
1.21

Tables:   1

The End!