Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001860.1 Hibiscus syriacus cultivar Beakdansim tig00003763_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87029

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5630--5665
17
2.1
17
89
0
54
30
11
27
30
1.91
9016--9057
20
2.2
19
87
8
59
38
28
0
33
1.58
9025--9064
20
2.0
20
90
0
62
40
27
0
32
1.57
10424--10466
20
2.3
19
88
8
61
37
30
0
32
1.58
11843--11873
13
2.3
14
94
5
55
61
12
12
12
1.58
14173--14234
2
32.5
2
87
9
94
48
0
1
50
1.10
20985--21075
32
2.8
33
80
5
105
35
15
12
37
1.84
28144--28170
2
13.5
2
100
0
54
48
0
0
51
1.00
36961--36985
2
12.5
2
100
0
50
48
0
0
52
1.00
37300--37324
2
12.5
2
100
0
50
48
0
0
52
1.00
38075--38105
6
5.2
6
100
0
62
19
32
0
48
1.49
39881--39944
19
3.3
19
80
10
76
21
15
25
37
1.93
40003--40040
19
2.0
19
90
10
60
31
26
10
31
1.90
42362--42835
237
2.0
237
97
0
903
34
25
17
23
1.96
50892--51587
135
5.1
135
84
4
821
30
12
16
40
1.85
50892--51660
272
2.9
269
86
5
999
29
12
17
41
1.85
59151--59177
2
13.5
2
100
0
54
48
0
0
51
1.00
62654--62715
31
2.0
32
83
3
81
48
3
6
41
1.45
80292--80331
20
2.0
21
90
5
64
42
15
25
17
1.88

Tables:   1

The End!