Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000187.1 Hibiscus syriacus cultivar Beakdansim tig00000336_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  209407

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
176929--176965
14
2.6
14
91
0
65
45
24
0
29
1.53
178323--178389
21
3.2
21
68
4
55
19
20
35
23
1.95
178323--178445
42
2.9
41
79
7
113
22
18
36
21
1.95
180433--180592
19
8.8
19
69
15
79
46
18
21
13
1.83
180433--180543
33
3.1
37
83
11
103
42
19
24
13
1.87
180458--180543
33
2.6
33
92
1
136
39
22
25
12
1.89
180528--180597
19
3.7
19
86
0
95
50
18
18
12
1.78
181197--181241
20
2.2
20
92
0
72
26
20
26
26
1.99
181252--181305
20
2.7
20
97
0
99
25
18
24
31
1.97
184076--184100
12
2.1
12
100
0
50
36
0
24
40
1.55
190332--190407
24
3.2
24
83
3
73
43
21
13
22
1.86
190349--190464
24
4.8
24
87
6
155
38
19
15
25
1.91
191438--191490
26
2.0
26
85
0
70
26
20
16
35
1.94
192890--192938
8
6.4
8
77
22
52
20
26
38
14
1.91
192890--192923
15
2.1
16
89
10
52
23
29
35
11
1.90
192913--192956
13
3.5
13
84
6
54
15
20
43
20
1.88
192915--192953
12
3.2
12
88
3
51
17
17
43
20
1.88
201732--201793
29
2.2
30
82
11
85
54
1
9
33
1.43
202430--202478
22
2.2
22
82
7
64
6
22
0
71
1.08
202439--202477
12
3.3
12
82
17
55
7
23
0
69
1.14
204792--204846
26
2.1
26
96
0
101
34
29
25
10
1.90
206954--206995
20
2.2
20
86
4
59
61
0
21
16
1.34

Tables:   1   2

The End!