Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001936.1 Hibiscus syriacus cultivar Beakdansim tig00003921_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72575

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
882--944
21
3.0
22
93
4
103
19
33
22
25
1.97
1525--1568
12
3.5
12
85
11
61
56
11
0
31
1.35
1527--1569
14
3.2
14
90
9
72
58
13
0
27
1.37
1722--1772
23
2.3
22
93
3
84
33
17
0
49
1.47
1826--2464
116
5.6
115
91
4
962
30
22
24
22
1.99
4237--4380
72
2.0
72
98
0
279
27
17
6
47
1.73
5398--5453
22
2.6
22
83
10
64
48
0
0
51
1.00
5362--5457
26
3.5
26
77
12
77
47
0
2
50
1.12
5425--5463
20
2.0
20
89
0
60
53
0
0
46
1.00
24145--24174
5
6.0
5
100
0
60
0
40
0
60
0.97
30438--30498
20
2.9
21
85
7
70
16
26
32
24
1.96
34302--34341
21
1.9
21
85
10
55
35
10
2
52
1.48
37500--37545
2
23.0
2
100
0
92
50
0
0
50
1.00
37563--37787
85
2.7
84
92
2
369
29
18
21
30
1.97
37784--37848
26
2.5
26
97
0
121
33
13
23
29
1.93
37784--37848
13
5.0
13
84
0
85
33
13
23
29
1.93
40903--41041
36
3.9
36
90
0
208
20
23
23
32
1.98
44072--44154
29
2.8
29
90
1
130
42
12
14
31
1.82
47510--47539
15
2.0
15
93
0
51
16
0
30
53
1.44
48810--48890
29
2.8
29
92
1
135
41
12
13
32
1.82
52299--52328
15
2.0
15
93
0
51
23
0
3
73
0.98
52423--52491
34
2.1
33
86
2
93
34
2
7
55
1.43
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58414--58529
58
2.0
58
96
0
214
23
25
11
40
1.87
58710--58744
16
2.2
16
100
0
70
42
5
5
45
1.51

Tables:   1

The End!