Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01001994.1 Hibiscus syriacus cultivar Beakdansim tig00004084_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67896

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2670--2728
22
2.7
22
74
10
57
40
18
8
32
1.81
6267--6303
18
2.0
19
89
5
58
35
0
0
64
0.94
17181--17227
22
2.1
22
84
4
58
57
4
4
34
1.38
19045--19074
15
1.9
16
93
6
53
50
0
0
50
1.00
27039--27167
24
5.4
24
84
5
100
42
18
13
24
1.87
27056--27171
24
4.8
24
87
4
162
39
18
16
25
1.91
28279--28314
18
2.0
18
88
0
54
30
16
0
52
1.44
29652--29687
13
2.8
13
100
0
72
16
16
50
16
1.79
29639--29674
18
2.0
18
94
0
63
13
19
50
16
1.79
31843--31894
24
2.2
24
86
6
70
46
19
11
23
1.82
31860--31951
24
3.8
24
84
5
123
39
17
16
27
1.91
34405--34438
15
2.3
15
89
0
50
26
23
32
17
1.97
34427--34469
13
3.3
13
86
0
68
18
20
44
16
1.87
35683--35740
10
5.6
10
84
8
71
68
3
5
22
1.24
35683--35740
21
2.8
20
82
7
71
68
3
5
22
1.24
36420--36474
10
5.5
10
74
8
58
23
1
1
72
1.04
40588--40690
40
2.6
40
93
3
172
42
13
15
28
1.85
40731--40764
14
2.4
14
95
0
59
14
2
14
67
1.34
41031--41097
10
6.1
10
80
19
80
8
8
20
61
1.53
41031--41098
23
3.0
23
100
0
136
8
8
20
61
1.52
41409--41462
20
2.7
20
77
11
65
46
1
0
51
1.11
47507--47572
32
2.1
32
97
0
123
21
15
10
53
1.72
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51620--51680
30
2.0
30
96
0
113
9
29
22
37
1.87
52477--52524
20
2.4
20
85
0
69
75
4
0
20
0.97
52477--52524
21
2.4
20
86
10
71
75
4
0
20
0.97
54559--54588
14
2.1
14
93
0
51
76
0
0
23
0.78
55094--55143
23
2.2
23
88
0
73
32
12
22
34
1.90
55100--55149
23
2.2
23
96
0
91
32
8
20
40
1.81
57762--57802
18
2.3
18
86
0
55
31
19
29
19
1.96

Tables:   1

The End!