Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002044.1 Hibiscus syriacus cultivar Beakdansim tig00004165_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76795

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
735--823
46
2.0
45
84
4
117
32
29
15
22
1.95
735--857
47
2.7
46
79
5
133
31
28
17
22
1.96
2876--2953
31
2.5
31
89
0
120
38
19
0
42
1.51
4807--4884
31
2.5
31
89
0
120
38
19
0
42
1.51
20367--20393
13
2.1
13
100
0
54
37
25
14
22
1.93
32761--32808
22
2.3
22
89
7
73
66
2
2
29
1.14
32767--32807
14
2.9
15
78
10
50
73
0
2
24
0.96
33251--33310
23
2.5
23
86
10
77
35
1
1
61
1.16
33473--33538
24
2.9
23
80
14
66
24
1
3
71
1.09
33466--33520
22
2.5
23
85
11
80
27
0
1
70
0.97
33631--33684
23
2.6
20
83
13
65
31
0
1
66
1.02
33416--33747
165
2.0
167
97
1
632
38
3
6
51
1.45
34755--34788
2
17.5
2
93
6
61
50
0
0
50
1.00
35268--35304
3
12.3
3
100
0
74
67
0
0
32
0.91
37467--37499
2
17.0
2
87
6
50
54
0
0
45
0.99
39063--39127
21
3.0
21
80
13
69
44
23
1
30
1.62
39072--39127
21
2.6
22
83
8
71
44
21
1
32
1.63
39241--39277
20
1.9
19
89
10
58
45
10
24
18
1.81
44555--44591
18
2.1
18
100
0
74
21
21
35
21
1.96
44559--44598
18
2.2
18
90
0
62
27
22
27
22
1.99
44658--44700
21
2.0
21
100
0
86
27
25
18
27
1.98
44803--44861
17
3.5
17
100
0
118
45
16
5
32
1.70
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46976--47018
2
21.5
2
100
0
86
51
0
0
48
1.00
57926--57981
21
2.7
21
80
0
67
25
37
28
8
1.86
61305--61388
37
2.5
31
75
20
87
50
3
0
46
1.19
62359--62435
20
3.8
20
85
0
82
25
23
9
41
1.84
62359--62436
40
2.0
40
81
0
93
25
23
8
42
1.83
62990--63033
3
14.7
3
95
0
79
29
0
0
70
0.88

Tables:   1

The End!