Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002074.1 Hibiscus syriacus cultivar Beakdansim tig00004237_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51889

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16001--16043
20
2.2
20
91
0
68
44
25
9
20
1.81
16174--16240
28
2.4
28
97
0
125
34
37
13
14
1.86
16989--17016
2
14.0
2
100
0
56
0
0
50
50
1.00
18458--18520
31
2.0
31
93
0
108
14
23
12
49
1.78
19852--20047
37
5.4
34
77
11
160
46
3
5
43
1.44
19849--20047
74
2.7
72
84
6
240
46
3
5
44
1.43
20228--20296
3
22.3
3
75
16
52
26
2
1
69
1.11
20244--20298
19
2.9
19
83
5
58
23
3
0
72
1.00
20230--20286
16
3.5
15
76
11
51
26
3
1
68
1.15
23438--23482
19
2.4
19
92
3
74
11
13
8
66
1.44
26809--27583
165
4.7
165
84
3
765
30
24
20
24
1.98
26809--27425
249
2.5
246
89
3
934
30
24
20
24
1.99
28221--28343
37
3.3
36
80
6
140
46
4
7
42
1.50
28151--28345
74
2.6
74
82
7
236
47
4
5
43
1.46
28534--28587
19
2.9
19
86
2
65
22
3
0
74
0.98
37722--38788
12
89.4
12
97
2
2001
33
0
16
49
1.48
37710--38789
6
180.0
6
97
0
540
33
0
16
49
1.47
37722--38788
18
59.6
18
96
2
2001
33
0
16
49
1.48
41020--41044
13
1.9
13
100
0
50
44
0
0
56
0.99
41249--41316
31
2.2
31
84
7
86
45
0
1
52
1.09

Tables:   1

The End!