Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002092.1 Hibiscus syriacus cultivar Beakdansim tig00004266_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59582

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2013--2067
25
2.2
25
83
0
65
56
1
3
38
1.28
2070--2163
25
3.8
24
81
16
104
52
1
5
41
1.31
2068--2163
49
1.9
50
82
14
119
52
1
5
41
1.31
2381--2413
13
2.4
14
85
5
50
60
0
0
39
0.97
3094--3136
15
2.7
15
89
7
59
30
11
23
34
1.90
4239--4393
18
8.5
18
87
5
231
45
16
6
31
1.72
7845--7893
14
3.4
14
77
5
62
44
6
16
32
1.72
7847--7894
15
3.3
15
72
16
55
47
6
14
31
1.69
8037--8109
23
3.1
23
76
5
58
45
1
2
50
1.24
8061--8106
24
2.0
23
83
12
58
45
2
0
52
1.13
8239--8318
32
2.5
32
80
15
85
50
0
3
46
1.19
8269--8336
23
3.0
24
80
6
70
52
0
1
45
1.09
8234--8372
53
2.6
53
77
12
126
47
0
3
48
1.19
9418--9478
23
2.7
23
92
0
104
29
26
27
16
1.97
10903--10960
20
2.7
20
78
10
62
29
20
17
32
1.95
14814--15082
90
2.9
89
91
5
367
46
11
8
34
1.70
14942--15080
44
3.1
44
63
25
110
43
8
9
38
1.68
28580--28796
105
2.1
105
85
3
303
35
13
11
38
1.82
38843--39137
63
4.6
63
86
2
358
13
8
44
33
1.74
42405--42531
66
1.9
66
87
3
184
38
11
9
40
1.74
48436--48511
31
2.5
31
88
0
107
50
14
9
26
1.73
51957--51989
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!