Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002165.1 Hibiscus syriacus cultivar Beakdansim tig00004421_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44197

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5228--5262
15
2.4
15
90
4
54
40
0
0
60
0.97
7640--7687
20
2.4
20
100
0
96
43
4
8
43
1.53
9053--9119
18
3.5
19
76
13
66
20
7
0
71
1.10
9087--9143
27
2.0
29
86
6
82
15
5
1
77
1.03
9167--9209
23
1.9
22
85
4
59
18
11
0
69
1.17
9218--9266
19
2.7
17
75
12
53
18
2
4
75
1.06
9300--9350
21
2.4
21
78
15
52
19
9
0
70
1.14
9338--9388
9
5.8
9
74
21
54
19
3
0
76
0.94
12272--12457
95
2.0
94
91
3
302
32
17
18
31
1.95
14331--14473
37
3.9
37
92
1
234
25
23
15
36
1.94
14386--14640
102
2.5
102
87
3
343
27
21
12
38
1.90
14489--14584
37
2.6
37
86
3
122
26
19
12
41
1.87
14516--14670
66
2.3
67
83
7
192
28
20
12
38
1.89
15726--15772
23
2.0
23
84
8
60
29
2
2
65
1.15
15818--15868
20
2.6
19
81
6
66
23
3
0
72
1.01
15945--15987
23
1.9
22
85
4
59
18
11
0
69
1.17
16116--16150
14
2.5
14
85
0
52
17
5
0
77
0.96
17222--17246
12
2.1
12
100
0
50
60
8
8
24
1.52
23017--23073
28
2.0
28
100
0
114
28
29
14
28
1.95
28741--28818
24
3.2
24
65
22
63
34
12
15
37
1.86
28750--28826
23
3.2
23
65
22
59
35
15
15
33
1.89
28722--28830
49
2.2
49
95
0
191
34
14
15
34
1.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
29064--29108
14
3.3
14
87
9
58
77
0
2
20
0.87
39073--39109
10
3.6
10
89
7
56
0
0
24
75
0.80
40827--40857
2
16.0
2
93
6
55
48
0
0
51
1.00
42464--42494
2
16.0
2
93
6
55
51
0
0
48
1.00

Tables:   1

The End!