Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000219.1 Hibiscus syriacus cultivar Beakdansim tig00000387_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  169236

Tables:   1   2   

This is table  2  of  2  ( 137 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
124864--124901
16
2.4
16
100
0
76
18
31
18
31
1.95
132294--132344
24
2.1
24
82
7
59
45
17
9
27
1.80
133012--133059
19
2.5
20
86
3
62
14
16
43
25
1.86
133811--133957
67
2.2
67
84
3
181
38
10
23
27
1.88
133906--134236
36
9.4
36
77
9
308
38
13
22
25
1.91
133927--134136
109
1.9
109
91
1
341
40
12
22
24
1.88
133940--134313
109
3.6
101
80
9
301
39
13
19
26
1.89
134375--134733
36
9.6
36
69
11
154
35
9
18
35
1.84
134368--134743
189
2.0
190
93
2
641
36
9
18
36
1.83
136910--136963
25
2.2
25
100
0
108
48
0
18
33
1.49
137593--137677
23
3.8
22
76
7
75
25
20
25
28
1.99
137845--137893
19
2.7
19
76
14
50
30
2
18
48
1.59
146508--146542
17
2.1
17
94
0
61
51
5
20
22
1.68
147466--147528
27
2.4
25
78
14
65
11
19
3
66
1.36
148221--148289
30
2.2
30
80
15
77
39
4
17
39
1.69
148230--148289
30
2.0
31
87
6
88
38
5
16
40
1.71
157541--157591
21
2.4
22
93
3
86
27
9
13
49
1.74

Tables:   1   2

The End!