Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01002311.1 Hibiscus syriacus cultivar Beakdansim tig00004710_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73346

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6830--6866
16
2.2
18
85
9
51
67
2
0
29
1.04
12640--12860
111
2.0
111
86
1
309
32
16
29
22
1.95
21848--21893
15
3.1
15
93
0
74
8
65
17
8
1.45
27423--27701
74
3.8
73
85
1
360
46
23
11
18
1.81
27416--27682
148
1.8
147
87
4
403
46
23
11
18
1.81
31192--31236
2
22.5
2
100
0
90
48
0
0
51
1.00
31297--31437
73
1.9
72
92
1
237
23
22
7
46
1.76
35789--35821
17
2.0
17
88
5
50
36
0
3
60
1.12
36110--36183
25
3.0
25
95
0
130
22
5
6
64
1.38
37826--37867
15
2.9
15
78
3
50
26
9
40
23
1.85
40273--40312
21
1.9
21
94
0
71
20
40
7
32
1.80
40387--40436
21
2.4
21
86
0
64
30
36
4
30
1.76
40921--40983
33
1.9
33
83
0
81
42
26
11
19
1.84
40916--40991
33
2.3
33
76
2
80
46
23
11
18
1.82
44080--44106
2
13.5
2
100
0
54
51
0
0
48
1.00
47065--47104
2
20.0
2
100
0
80
50
0
0
50
1.00
51297--51372
29
2.6
30
89
2
118
19
36
11
31
1.88
58242--58291
23
2.2
23
100
0
100
64
0
10
26
1.25
60787--60855
22
3.4
22
67
19
67
10
18
39
31
1.84
60775--60864
39
2.3
39
96
0
162
8
18
44
27
1.80
69778--70081
154
2.0
154
91
3
497
29
17
5
47
1.71
71007--71116
53
2.1
53
96
0
202
34
6
23
35
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72937--72976
19
2.0
20
85
9
55
67
5
15
12
1.38

Tables:   1

The End!